Bones reluctantly searches for a replacement for Zack. A skull is tossed off a highway overpass and hits a vehicle. There is evidence the victim was eaten by a cannibal.

Brennan's father Max goes on trial for the alleged murder of FBI Deputy Director Robert Kirby, requiring everyone on the Jeffersonian team but Brennan to testify for the prosecution. Brennan, the forensics advisor for the defense, desperately tries to prove her father's innocence. Meanwhile, Booth requires the assistance of therapist Dr. Lance Sweets to help with his partnership with Brennan.

During Bones' stay in England, the daughter of an American businessman is murdered. The businessman insists that the FBI help with the case, so Booth and Bones investigate. Meanwhile, Angela's husband shows up at the Jeffersonian.

A body flies out of an exploding meth lab. As the team tries to identify the body, Booth works on a big case which could boost his career, but he's distracted when his brother shows up and shows some interest in Bones.

The murder of a doctor at a Wildlife Reserve gets a little personal for Cam, when the victim turns out to be a former paramour. Angela tries to go celibate to work on her relationship issues.

Skeletal remains used by a Norwegian Black Metal Band lead the team to explore the underground music scene. Gordon-Gordon prepares to retire from psychology, but not before meeting with Sweets and helping Bones and Booth solve their current case.

Story of a murder in a nightclub with multiple suspects, with familiar faces in a different perspective. When the story's finished, Booth's health crisis takes an unexpected twist.

Bones and Booth investigate the murder of an Amish piano prodigy.

In Howard Fileman's house, which is for sale, estate agent Katie Selnick and two prospective buyers discover a corpse, charred except for a fat foot. Clever forensics gradually show it was actually two people, a fat man and PriceCo saleswoman Meg Tracy, who recently lost half her excessive weight and met her lover in a fetishist club. Seeley however is greatly distracted by a surprise visits from Hank 'Pops' Booth, who left his retirement home after hitting a male nurse and now tries to "correct" Booth's life, but rather lost control of his own.

When human remains are discovered in the belly of a shark, Brennan and Booth are brought in to identify the missing person. Evidence suggesting the victim had been the prey of several fish directs the team's investigation to The Aquarium of the Atlantic, where a guest lecturer and notorious self-help guru preaching the healing power of the ocean has gone missing. Meanwhile, both Brennan and Booth navigate their own relationship when a marine biologist shows interest in Booth.

A cabin burns down in the woods revealing two bodies - one of a modern-day witch and one from the days of the Salem Witch Trials - leading Booth and Brennan into the world of Wicca to find a killer. Meanwhile, when Hodgins' reckless driving gets him and Angela arrested and thrown in jail, Sweets and intern Clark Edison step into unfamiliar territory to help out the team.

When the remains of a couple are discovered in a cave at National Park, the team must piece together the identity of the man and the woman as well as solve the crime. After interrogating two viable suspects, the team identifies the woman as a marketing executive who also served as her partner's AA sponsor, providing clues that lead them to expose the truth. Meanwhile, Booth's girlfriend and Afghanistan war correspondent, Hannah Burley, makes a surprise visit. After meeting Burley and sensing the couple's genuine happiness, Brennan re-evaluates her own relationship with Booth, and he tries to teach her that love is not always logical.

An unidentifiable body is discovered in the shower of an upscale home belonging to a young female socialite. With the help of nosy bones expert and Jeffersonian "squint" Clark Edison, skeletal reconstruction and evidence in the drain reveal that the victim was a young girl employed by a counterfeit handbag distributor. The team learns that the victim supplied counterfeit purses to her socialite acquaintance, and after interrogating the self-centered socialite and sifting through footage on a hidden camera, they discover evidence linking them to the murderer. Meanwhile, Angela and Hodgins discuss their future home and where they want to raise a family, and Booth opens up to Hannah about Brennan's feelings for him.

The liquefied remains of a wedding planner are found in her home tanning bed on Valentine's Day, and Cam pressures her team to solve the case in time so she can celebrate the holiday with her boyfriend. While the "squints" works tirelessly in the lab, Booth and Brennan interrogate a slew of possible suspects until they unlock classified files in the victim's computer, which lead to their main suspect. Meanwhile, Booth and Brennan downplay the significance of Valentine's Day, and Hodgins tries to plan a romantic day for Angela, but "squint" Clark helps him realize that the most meaningful gifts come from the heart.

Post staff finds several mail boxes filled with goo - actually a chopped-up human corpse. Their address labels were deliberately messed up so as to strand them in a specialized post office, but a code traces them to a local Ship 'n' Print, where one employee is missing and proved to be the victim. Most of his colleagues resigned after jointly winning a fortune in the lottery. Sweets helps cut trough their endless lies. Booth gets a surprise visit from grandpa, on account of the death of Seeley's ever-absent father, which he's most unwilling to discuss. Bones leaves most of the field work to Booth's ambitious FBI cadet Genevieve Shaw, to accommodate her pregnancy, which renders Clark most uncomfortable.

Metal hardware deliverer Tony Cole was fatally stabbed in a puzzling way. Booth is more preoccupied with his son Parker, finally back from England, and how to fit him in the family with Bones and baby sister Christine, and Sweets is through with counseling under false pretenses. Hodgins uses the case to prove his expensive 'pet' equipment is all useful. Tony had a bitter company rival, Karl Singler, and picked a fight with his beloved boy Danny's karate sensei, Hunter Sherman, over a fight with sprout Blake Sherman.

Months later, Brennan is still on the run from the FBI, after being framed for murder by Christopher Pelant. The remaining team searches for the real killer.

Brennan, intrigued by Phil Jackson's management style, pulls all her interns together as a team for a project worthy of the basketball coach's philosophy. She charges them with identifying remains that have been determined unidentifiable. For the team, however, it turns out that naming the bodies may be the easiest part of their task when one of them is from 9/11 and they must decide if he is a victim or perpetrator.

An archaeologist is found murdered. His lab holds ancient remains of Neanderthals and Homosapiens; these are given to Clark to research. Brennan is jealous that she has to work the current case and not the ancient one.

When Brennan is shot while working late at the Jeffersonian lab, she is rushed to the hospital in critical condition. While at the hospital, she struggles with visions of her mother that defy her usual logic. Meanwhile all evidence suggests that Brennan's attacker may be linked to the Jeffersonian.

An undercover police officer, who was investigating a string of ATM robberies, turns up dead in a van with a bag of diamonds found inside his mutilated body. So the Jeffersonian team must figure out whether or not the ATM robbers are also murderers, or if the cop was crooked. Meanwhile, Brennan is the subject of a documentary commissioned to raise funds for the Jeffersonian, and she struggles to be likeable on camera.

Brennan and Booth are to be married tomorrow, but not without a murder to solve. The team calls in all interns to help with the case so Brennan does not have to do anything.

Brennan & Booth are in Buenos Aires for their honeymoon. Brennan is not used to sitting idle so she takes Booth to a morgue, and she finds unidentified bones of a victim. She and Booth help the local police solve the crime.

The Jeffersonian team investigates the death of Lana Brewster, a girl whose remains are delivered to Brennan and Booth's home by someone who believes her death 18 years ago was no accident. When the team discovers that Lana was murdered and her death was covered up, people from her past become key suspects, including an ex-boyfriend with whom Hodgins was friends. Meanwhile, Brennan starts having dreams again about evil tech genius Pelant, and about a potentially more heinous killer, whom she realizes could be involved with Lana's death.

When a children's TV show actor is found dead, the Jeffersonian team goes behind the scenes to uncover who murdered everyone's favorite character, "Carrot Bill". But when the team discovers that the actor was known for his promiscuity, they start to uncover some unlikely suspects. Meanwhile, Booth and Brennan plan Christine's first birthday party, and Clark asks the team for their opinions on a fictional novel he's completed.

The Jeffersonian team investigates the death of Stephanie McNamara, the daughter of a wealthy family whose remains were found in a national park. When the team digs deeper into the circumstances surrounding her death, clues from the case lead them to believe she may be the Ghost Killer's latest victim, with a surprising connection to a previous victim. Meanwhile, the FBI Deputy Director takes a special interest in the team's high-profile case and Booth's career may be in for some changes.

Booth is in prison after being framed for killing three FBI agents. Now it is up to Brennan, Sweets and the rest of the Jeffersonian team to find out who in the FBI is behind the Conspiracy.

The team puts their beloved psychologist to rest. But before they can, they need his help to find his killer who can help them get even closer to who is behind the conspiracy.

In 1950s Hollywood, Brennan is a LAPD detective faced with sexism on the force, and Booth is a notorious jewel thief - who is framed for murder.

The team investigates when the remains of a celebrity chef are discovered at a local park.

As the team investigates a murder, evidence found in the crime scene reminds them of an old enemy. Elsewhere, Angela worries about Hodgins' and her decision, while Booth and Brennan consider a life without the Jeffersonian.

An escape artist's corpse is found in the woods; Booth and Brennan try to decide if the tooth fairy should visit Christine; Angela works on her photography with Sebastian Kohl (Gil Darnell).

The remains of a billionaire explorer are found ten years after his disappearance and Dr. Clark Edison becomes a suspect since he was part of the expedition. Meanwhile, Cam argues with her sister when she comes to help with her wedding plans.

A young woman's death leads Booth & Aubrey to Canada. Meanwhile Hodgins & Clark make an interesting discovery & Brennan attempts to deal with her grief, with the help of an old friend.

Booth attempts to protect himself and those closest to him when Kovac escapes and initiates his most dangerous plan yet.

The team searches for evidence to track down Kovac.

An unidentifiable body is discovered in the shower of an upscale home belonging to a young female socialite. With the help of nosy bones expert and Jeffersonian "squint" Clark Edison, skeletal reconstruction and evidence in the drain reveal that the victim was a young girl employed by a counterfeit handbag distributor. The team learns that the victim supplied counterfeit purses to her socialite acquaintance, and after interrogating the self-centered socialite and sifting through footage on a hidden camera, they discover evidence linking them to the murderer. Meanwhile, Angela and Hodgins discuss their future home and where they want to raise a family, and Booth opens up to Hannah about Brennan's feelings for him.

An archaeologist is found murdered. His lab holds ancient remains of Neanderthals and Homosapiens; these are given to Clark to research. Brennan is jealous that she has to work the current case and not the ancient one.

When the remains of a couple are discovered in a cave at National Park, the team must piece together the identity of the man and the woman as well as solve the crime. After interrogating two viable suspects, the team identifies the woman as a marketing executive who also served as her partner's AA sponsor, providing clues that lead them to expose the truth. Meanwhile, Booth's girlfriend and Afghanistan war correspondent, Hannah Burley, makes a surprise visit. After meeting Burley and sensing the couple's genuine happiness, Brennan re-evaluates her own relationship with Booth, and he tries to teach her that love is not always logical.

The liquefied remains of a wedding planner are found in her home tanning bed on Valentine's Day, and Cam pressures her team to solve the case in time so she can celebrate the holiday with her boyfriend. While the "squints" works tirelessly in the lab, Booth and Brennan interrogate a slew of possible suspects until they unlock classified files in the victim's computer, which lead to their main suspect. Meanwhile, Booth and Brennan downplay the significance of Valentine's Day, and Hodgins tries to plan a romantic day for Angela, but "squint" Clark helps him realize that the most meaningful gifts come from the heart.

The Jeffersonian team investigates the death of Lana Brewster, a girl whose remains are delivered to Brennan and Booth's home by someone who believes her death 18 years ago was no accident. When the team discovers that Lana was murdered and her death was covered up, people from her past become key suspects, including an ex-boyfriend with whom Hodgins was friends. Meanwhile, Brennan starts having dreams again about evil tech genius Pelant, and about a potentially more heinous killer, whom she realizes could be involved with Lana's death.

The remains of a billionaire explorer are found ten years after his disappearance and Dr. Clark Edison becomes a suspect since he was part of the expedition. Meanwhile, Cam argues with her sister when she comes to help with her wedding plans.

When human remains are discovered in the belly of a shark, Brennan and Booth are brought in to identify the missing person. Evidence suggesting the victim had been the prey of several fish directs the team's investigation to The Aquarium of the Atlantic, where a guest lecturer and notorious self-help guru preaching the healing power of the ocean has gone missing. Meanwhile, both Brennan and Booth navigate their own relationship when a marine biologist shows interest in Booth.

A young woman's death leads Booth & Aubrey to Canada. Meanwhile Hodgins & Clark make an interesting discovery & Brennan attempts to deal with her grief, with the help of an old friend.

An escape artist's corpse is found in the woods; Booth and Brennan try to decide if the tooth fairy should visit Christine; Angela works on her photography with Sebastian Kohl (Gil Darnell).

When a children's TV show actor is found dead, the Jeffersonian team goes behind the scenes to uncover who murdered everyone's favorite character, "Carrot Bill". But when the team discovers that the actor was known for his promiscuity, they start to uncover some unlikely suspects. Meanwhile, Booth and Brennan plan Christine's first birthday party, and Clark asks the team for their opinions on a fictional novel he's completed.